MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Jeotgalicoccus nanhaiensis
19428wE5_W307
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 28
bases: 2,247,970 bps
CDS: 2,232
rRNA: 7
Repeat region:
tmRNA: 1
tRNA: 55
misc RNA:
Total features: 2,295
Total number of protein coding genes annotated/found:
2,232
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Items 1 - 20
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA)
Range ^
Gene Product Name
SEQF5028|JADGLW010000002.1
SEQF5028_00690
Genome Viewer
NA
AA
7887/2629
45370-53256
hypothetical protein
SEQF5028|JADGLW010000001.1
SEQF5028_00234
Genome Viewer
NA
AA
4284/1428
50311-46028
DNA polymerase III PolC-type
SEQF5028|JADGLW010000009.1
SEQF5028_02219
Genome Viewer
NA
AA
3621/1207
8605-4985
DNA-directed RNA polymerase subunit beta'
SEQF5028|JADGLW010000001.1
SEQF5028_00263
Genome Viewer
NA
AA
3555/1185
80313-76759
Chromosome partition protein Smc
SEQF5028|JADGLW010000009.1
SEQF5028_02220
Genome Viewer
NA
AA
3543/1181
12187-8645
DNA-directed RNA polymerase subunit beta
SEQF5028|JADGLW010000009.1
SEQF5028_02264
Genome Viewer
NA
AA
3483/1161
52985-49503
Transcription-repair-coupling factor
SEQF5028|JADGLW010000001.1
SEQF5028_00466
Genome Viewer
NA
AA
3480/1160
296434-292955
ATP-dependent helicase/deoxyribonuclease subunit B
SEQF5028|JADGLW010000001.1
SEQF5028_00465
Genome Viewer
NA
AA
3456/1152
292962-289507
ATP-dependent helicase/nuclease subunit A
SEQF5028|JADGLW010000002.1
SEQF5028_00970
Genome Viewer
NA
AA
3384/1128
322485-325868
GTPase Era
SEQF5028|JADGLW010000003.1
SEQF5028_01308
Genome Viewer
NA
AA
3237/1079
208512-211748
Swarming motility protein SwrC
SEQF5028|JADGLW010000004.1
SEQF5028_01626
Genome Viewer
NA
AA
3147/1049
56463-53317
Error-prone DNA polymerase
SEQF5028|JADGLW010000003.1
SEQF5028_01345
Genome Viewer
NA
AA
3018/1006
248528-245511
Swarming motility protein SwrC
SEQF5028|JADGLW010000002.1
SEQF5028_00738
Genome Viewer
NA
AA
3003/1001
105909-108911
Nuclease SbcCD subunit C
SEQF5028|JADGLW010000008.1
SEQF5028_02151
Genome Viewer
NA
AA
2928/976
50992-48065
hypothetical protein
SEQF5028|JADGLW010000002.1
SEQF5028_01096
Genome Viewer
NA
AA
2880/960
457704-454825
hypothetical protein
SEQF5028|JADGLW010000007.1
SEQF5028_02051
Genome Viewer
NA
AA
2880/960
55917-58796
ATP-dependent RNA helicase SrmB
SEQF5028|JADGLW010000001.1
SEQF5028_00552
Genome Viewer
NA
AA
2829/943
371590-368762
UvrABC system protein A
SEQF5028|JADGLW010000001.1
SEQF5028_00196
Genome Viewer
NA
AA
2820/940
2963-144
D-inositol-3-phosphate glycosyltransferase
SEQF5028|JADGLW010000002.1
SEQF5028_00990
Genome Viewer
NA
AA
2799/933
340051-342849
2-oxoglutarate dehydrogenase E1 component
SEQF5028|JADGLW010000005.1
SEQF5028_01740
Genome Viewer
NA
AA
2784/928
15769-12986
Type-1 restriction enzyme R protein
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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